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14 June 2019, Charlottesville: Scientific visualization workshop #574

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Daniel-Mietchen opened this issue Jun 14, 2019 · 8 comments

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commented Jun 14, 2019

Slides sit on Rivanna and partly in Box.

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commented Jun 14, 2019

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commented Jun 14, 2019

Demo data is brain images.

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commented Jun 14, 2019

First dataset being visualized was brain MRI, and specifically the hippocampus.

Next, we went into thoracic MRI and segmented out the spleen.

In both cases, we were using ITK-SNAP.

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commented Jun 14, 2019

Now on to remote sensing data.

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commented Jun 14, 2019

Python Imaging Library can read dozens of different file formats.
It is included in the PIL module.

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commented Jun 14, 2019

Good number of Python examples for image processing using this PIL module.
See remote_image.ipynb in the workshop's directory.

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commented Jun 14, 2019

Next thing we are looking at is Paraview, which is open source and based on the Visualization Toolkit.

It's great for many things but not too well suited for CSV files.

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