Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Include scan number in output spectra/MassBank records #218

Open
schymane opened this issue Jul 1, 2019 · 1 comment

Comments

Projects
None yet
1 participant
@schymane
Copy link
Member

commented Jul 1, 2019

See discussion
MassBank/MassBank-data#79

  • PSI identifier
  • GNPS example

Including the scan number will allow users to extract also the raw data - this will require also that we cross-link our records to the raw data (same discussion)

@schymane

This comment has been minimized.

Copy link
Member Author

commented Jul 1, 2019

We (@tsufz and I) would propose to have a new field to do this:
MS$DATA_PROCESSING: SCAN_NUMBER 1234
and we will post an issue in MassBank-web
@meier-rene @Treutler

@MaliRemorker @adelenelai the scan number is already used/available in the RMassBank workflow, do you want to investigate further? Will help debugging if it's in the records not just the failpeaks list.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
You can’t perform that action at this time.