Add travis (CDK-R#78)

* Start adding travis * Setup for R pkgs in subdirs, add java dep * Another attempt to install JDK * Attempt to install rJava * Attempt to install devtools prior to dependencies * Another attempt to install devtools prior to dependencies * Add rcdk as well * Debug dep installation on travis * Fix package root for newer R version
schymane · Oct 29, 2018 · 2ac7f5a8f2086643cf3cf434a5cc642646a96b7b · 2ac7f5a
1 parent 3aa6a3e
commit 2ac7f5a8f2086643cf3cf434a5cc642646a96b7b
Unified Split

Showing with 30 additions and 5 deletions.

+30 −5 .travis.yml
diff --git a/.travis.yml b/.travis.yml
@@ -1,6 +1,31 @@
-language: r
+# R for travis: see documentation at https://docs.travis-ci.com/user/languages/r
+
+language: R
+sudo: false
 cache: packages
-warnings_are_errors: true
-sudo: required
-before_install:
-  - cd rcdk
+
+addons:
+  apt:
+    packages:
+      - openjdk-8-jdk
+
+## Because we have several packages in the git repo, 
+## we need to manually install and test: 
+## https://docs.travis-ci.com/user/languages/r/#customizing-the-travis-build-steps
+install: 
+  - R -e 'install.packages("devtools")'
+  - R -e 'devtools::install_deps(pkg = "rcdklibs", dep = T)'
+  - R -e 'devtools::install_deps(pkg = "rcdk", dep = T)'
+
+## Inspired by 
+## http://jtleek.com/protocols/travis_bioc_devel/#Configuring_R_CMD_check
+## https://raw.githubusercontent.com/craigcitro/r-travis/master/scripts/travis-tool.sh
+## Make sure to INSTALL after checking, so that rcdk has its latest 
+## dependencies from this github available, overwriting above 
+script:
+- R CMD build rcdklibs
+- R CMD check $(ls -1t *.tar.gz | head -n 1)
+- R CMD INSTALL $(ls -1t *.tar.gz | head -n 1)
+- R CMD build rcdk
+- R CMD check $(ls -1t *.tar.gz | head -n 1)
+