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Add travis (CDK-R#78)

* Start adding travis

* Setup for R pkgs in subdirs, add java dep

* Another attempt to install JDK

* Attempt to install rJava

* Attempt to install devtools prior to dependencies

* Another attempt to install devtools prior to dependencies

* Add rcdk as well

* Debug dep installation on travis

* Fix package root for newer R version
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sneumann authored and rajarshi committed Oct 29, 2018
1 parent 3aa6a3e commit 2ac7f5a8f2086643cf3cf434a5cc642646a96b7b
Showing with 30 additions and 5 deletions.
  1. +30 −5 .travis.yml
@@ -1,6 +1,31 @@
language: r
# R for travis: see documentation at https://docs.travis-ci.com/user/languages/r
language: R
sudo: false
cache: packages
warnings_are_errors: true
sudo: required
before_install:
- cd rcdk
addons:
apt:
packages:
- openjdk-8-jdk
## Because we have several packages in the git repo,
## we need to manually install and test:
## https://docs.travis-ci.com/user/languages/r/#customizing-the-travis-build-steps
install:
- R -e 'install.packages("devtools")'
- R -e 'devtools::install_deps(pkg = "rcdklibs", dep = T)'
- R -e 'devtools::install_deps(pkg = "rcdk", dep = T)'
## Inspired by
## http://jtleek.com/protocols/travis_bioc_devel/#Configuring_R_CMD_check
## https://raw.githubusercontent.com/craigcitro/r-travis/master/scripts/travis-tool.sh
## Make sure to INSTALL after checking, so that rcdk has its latest
## dependencies from this github available, overwriting above
script:
- R CMD build rcdklibs
- R CMD check $(ls -1t *.tar.gz | head -n 1)
- R CMD INSTALL $(ls -1t *.tar.gz | head -n 1)
- R CMD build rcdk
- R CMD check $(ls -1t *.tar.gz | head -n 1)

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