Permalink
Browse files

Clean-up and organize project; resolves #40. (#50)

- Moves Docs -> doc
- Moves tests -> src/tests
- Moves headers -> src/headers
- Moves src/*.c -> src/main
- Moves unity -> vendor/unity
- Updates Doxygen config
- Update Doxygen generated docs
- Update README
- Update all src files that need to be updated to reflect re-org
- Update Makefile so project builds
- Clean-up whitespace in src files
- Simplify Makefile
  • Loading branch information...
ruebot authored and greebie committed Sep 4, 2018
1 parent 0140db3 commit 3a99b9216da6233b4fb48ca7c0189925139d22b3
Showing with 1,224 additions and 1,401 deletions.
  1. +2 −0 .gitignore
  2. +0 −113 Docs/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html
  3. +0 −97 Docs/html/files.html
  4. +0 −115 Docs/html/globals_vars.html
  5. +0 −137 Docs/html/graphpass_8c.html
  6. +0 −105 Docs/html/graphpass_8h_source.html
  7. +0 −34 Docs/html/menudata.js
  8. +0 −4 Docs/html/search/all_b.js
  9. +0 −4 Docs/html/search/all_e.js
  10. +0 −5 Docs/html/search/functions_6.js
  11. +0 −4 Docs/html/search/functions_7.js
  12. +0 −4 Docs/html/search/variables_0.js
  13. +0 −5 Docs/html/search/variables_1.js
  14. +0 −1 Docs/html/tabs.css
  15. +0 −6 Docs/latex/annotated.tex
  16. +0 −15 Docs/latex/files.tex
  17. +0 −60 Docs/latex/graphpass_8c.tex
  18. +69 −69 Doxyfile
  19. +11 −11 Makefile
  20. +7 −8 README.md
  21. +0 −83 configure.scan
  22. 0 {Docs → doc}/html/analyze_8h.html
  23. 0 {Docs → doc}/html/analyze_8h_source.html
  24. +7 −11 {Docs → doc}/html/annotated.html
  25. BIN {Docs → doc}/html/bc_s.png
  26. BIN {Docs → doc}/html/bdwn.png
  27. +11 −15 {Docs → doc}/html/classes.html
  28. BIN {Docs → doc}/html/closed.png
  29. 0 {Docs → doc}/html/dir_59425e443f801f1f2fd8bbe4959a3ccf.html
  30. +83 −0 doc/html/dir_68267d1309a1af8e8297ef4c3efbcdba.html
  31. 0 {Docs → doc}/html/dir_6b23d51ea9a89549ea3e756c08c8ad26.html
  32. 0 {Docs → doc}/html/dir_7f57b1e41c5acd0e859ae5f3a2b075a9.html
  33. BIN {Docs → doc}/html/doc.png
  34. +1 −1 {Docs → doc}/html/doxygen.css
  35. BIN {Docs → doc}/html/doxygen.png
  36. +5 −28 {Docs → doc}/html/dynsections.js
  37. +92 −0 doc/html/files.html
  38. 0 {Docs → doc}/html/filter_8h.html
  39. 0 {Docs → doc}/html/filter_8h_source.html
  40. BIN {Docs → doc}/html/folderclosed.png
  41. BIN {Docs → doc}/html/folderopen.png
  42. 0 {Docs → doc}/html/gexf_8h.html
  43. 0 {Docs → doc}/html/gexf_8h_source.html
  44. +34 −10 {Docs → doc}/html/globals.html
  45. 0 {Docs → doc}/html/globals_defs.html
  46. +16 −10 {Docs → doc}/html/globals_func.html
  47. +91 −0 doc/html/globals_vars.html
  48. +257 −0 doc/html/graphpass_8c.html
  49. 0 {Docs → doc}/html/graphpass_8h.html
  50. +109 −0 doc/html/graphpass_8h_source.html
  51. +8 −11 {Docs → doc}/html/index.html
  52. 0 {Docs → doc}/html/io_8h.html
  53. 0 {Docs → doc}/html/io_8h_source.html
  54. +2 −30 {Docs → doc}/html/jquery.js
  55. 0 {Docs → doc}/html/md__c_o_d_e__o_f__c_o_n_d_u_c_t.html
  56. 0 {Docs → doc}/html/md__r_e_a_d_m_e.html
  57. +0 −24 {Docs → doc}/html/menu.js
  58. +11 −0 doc/html/menudata.js
  59. BIN {Docs → doc}/html/nav_f.png
  60. BIN {Docs → doc}/html/nav_g.png
  61. BIN {Docs → doc}/html/nav_h.png
  62. BIN {Docs → doc}/html/open.png
  63. 0 {Docs → doc}/html/pages.html
  64. 0 {Docs → doc}/html/quickrun_8h.html
  65. 0 {Docs → doc}/html/quickrun_8h_source.html
  66. 0 {Docs → doc}/html/reports_8h.html
  67. 0 {Docs → doc}/html/reports_8h_source.html
  68. 0 {Docs → doc}/html/rnd_8h.html
  69. 0 {Docs → doc}/html/rnd_8h_source.html
  70. +1 −5 {Docs → doc}/html/search/all_0.html
  71. 0 {Docs → doc}/html/search/all_0.js
  72. +1 −5 {Docs → doc}/html/search/all_1.html
  73. 0 Docs/html/search/functions_1.js → doc/html/search/all_1.js
  74. 0 {Docs → doc}/html/search/all_10.html
  75. 0 {Docs → doc}/html/search/all_10.js
  76. +1 −5 {Docs → doc}/html/search/all_2.html
  77. +1 −0 {Docs → doc}/html/search/all_2.js
  78. +1 −5 {Docs → doc}/html/search/all_3.html
  79. 0 Docs/html/search/files_2.js → doc/html/search/all_3.js
  80. +1 −5 {Docs → doc}/html/search/all_4.html
  81. 0 {Docs → doc}/html/search/all_4.js
  82. +1 −5 {Docs → doc}/html/search/all_5.html
  83. 0 {Docs → doc}/html/search/all_5.js
  84. +1 −5 {Docs → doc}/html/search/all_6.html
  85. +4 −0 doc/html/search/all_6.js
  86. +1 −5 {Docs → doc}/html/search/all_7.html
  87. 0 Docs/html/search/all_6.js → doc/html/search/all_7.js
  88. +1 −5 {Docs → doc}/html/search/all_8.html
  89. +1 −0 Docs/html/search/all_7.js → doc/html/search/all_8.js
  90. +1 −5 {Docs → doc}/html/search/all_9.html
  91. 0 Docs/html/search/all_8.js → doc/html/search/all_9.js
  92. +1 −5 {Docs → doc}/html/search/all_a.html
  93. +1 −0 Docs/html/search/all_9.js → doc/html/search/all_a.js
  94. +1 −5 {Docs → doc}/html/search/all_b.html
  95. 0 Docs/html/search/all_a.js → doc/html/search/all_b.js
  96. +1 −5 {Docs → doc}/html/search/all_c.html
  97. +8 −0 doc/html/search/all_c.js
  98. +1 −5 {Docs → doc}/html/search/all_d.html
  99. 0 Docs/html/search/all_c.js → doc/html/search/all_d.js
  100. +1 −5 {Docs → doc}/html/search/all_e.html
  101. 0 Docs/html/search/all_d.js → doc/html/search/all_e.js
  102. 0 {Docs → doc}/html/search/all_f.html
  103. 0 {Docs → doc}/html/search/all_f.js
  104. +1 −5 {Docs → doc}/html/search/classes_0.html
  105. 0 {Docs → doc}/html/search/classes_0.js
  106. +1 −5 {Docs → doc}/html/search/classes_1.html
  107. 0 {Docs → doc}/html/search/classes_1.js
  108. 0 {Docs → doc}/html/search/classes_2.html
  109. 0 {Docs → doc}/html/search/classes_2.js
  110. BIN {Docs → doc}/html/search/close.png
  111. 0 {Docs → doc}/html/search/defines_0.html
  112. 0 {Docs → doc}/html/search/defines_0.js
  113. +1 −5 {Docs → doc}/html/search/files_0.html
  114. 0 {Docs → doc}/html/search/files_0.js
  115. +1 −5 {Docs → doc}/html/search/files_1.html
  116. 0 {Docs → doc}/html/search/files_1.js
  117. +1 −5 {Docs → doc}/html/search/files_2.html
  118. +1 −2 Docs/html/search/all_3.js → doc/html/search/files_2.js
  119. +1 −5 {Docs → doc}/html/search/files_3.html
  120. 0 {Docs → doc}/html/search/files_3.js
  121. +1 −5 {Docs → doc}/html/search/files_4.html
  122. 0 {Docs → doc}/html/search/files_4.js
  123. +1 −5 {Docs → doc}/html/search/files_5.html
  124. 0 {Docs → doc}/html/search/files_5.js
  125. +1 −5 {Docs → doc}/html/search/files_6.html
  126. 0 {Docs → doc}/html/search/files_6.js
  127. +1 −5 {Docs → doc}/html/search/functions_0.html
  128. 0 {Docs → doc}/html/search/functions_0.js
  129. +1 −5 {Docs → doc}/html/search/functions_1.html
  130. +1 −2 Docs/html/search/all_1.js → doc/html/search/functions_1.js
  131. +1 −5 {Docs → doc}/html/search/functions_2.html
  132. 0 {Docs → doc}/html/search/functions_2.js
  133. +1 −5 {Docs → doc}/html/search/functions_3.html
  134. 0 {Docs → doc}/html/search/functions_3.js
  135. +1 −5 {Docs → doc}/html/search/functions_4.html
  136. 0 {Docs → doc}/html/search/functions_4.js
  137. +1 −5 {Docs → doc}/html/search/functions_5.html
  138. +4 −0 doc/html/search/functions_5.js
  139. +1 −5 {Docs → doc}/html/search/functions_6.html
  140. +1 −0 Docs/html/search/functions_5.js → doc/html/search/functions_6.js
  141. +1 −5 {Docs → doc}/html/search/functions_7.html
  142. +4 −0 doc/html/search/functions_7.js
  143. BIN {Docs → doc}/html/search/mag_sel.png
  144. 0 {Docs → doc}/html/search/nomatches.html
  145. 0 {Docs → doc}/html/search/pages_0.html
  146. 0 {Docs → doc}/html/search/pages_0.js
  147. 0 {Docs → doc}/html/search/pages_1.html
  148. 0 {Docs → doc}/html/search/pages_1.js
  149. 0 {Docs → doc}/html/search/search.css
  150. +1 −24 {Docs → doc}/html/search/search.js
  151. BIN {Docs → doc}/html/search/search_l.png
  152. BIN {Docs → doc}/html/search/search_m.png
  153. BIN {Docs → doc}/html/search/search_r.png
  154. +6 −6 {Docs → doc}/html/search/searchdata.js
  155. +1 −5 {Docs → doc}/html/search/variables_0.html
  156. +4 −0 doc/html/search/variables_0.js
  157. +1 −5 {Docs → doc}/html/search/variables_1.html
  158. +8 −0 doc/html/search/variables_1.js
  159. 0 {Docs → doc}/html/search/variables_2.html
  160. 0 {Docs → doc}/html/search/variables_2.js
  161. 0 {Docs → doc}/html/search/variables_3.html
  162. 0 {Docs → doc}/html/search/variables_3.js
  163. 0 {Docs → doc}/html/search/variables_4.html
  164. 0 {Docs → doc}/html/search/variables_4.js
  165. 0 {Docs → doc}/html/search/variables_5.html
  166. 0 {Docs → doc}/html/search/variables_5.js
  167. 0 {Docs → doc}/html/search/variables_6.html
  168. 0 {Docs → doc}/html/search/variables_6.js
  169. 0 {Docs → doc}/html/search/variables_7.html
  170. 0 {Docs → doc}/html/search/variables_7.js
  171. 0 {Docs → doc}/html/search/variables_8.html
  172. 0 {Docs → doc}/html/search/variables_8.js
  173. 0 {Docs → doc}/html/search/variables_9.html
  174. 0 {Docs → doc}/html/search/variables_9.js
  175. 0 {Docs → doc}/html/search/variables_a.html
  176. 0 {Docs → doc}/html/search/variables_a.js
  177. BIN {Docs → doc}/html/splitbar.png
  178. +8 −11 {Docs → doc}/html/struct_node.html
  179. +8 −11 {Docs → doc}/html/struct_rank_node.html
  180. 0 {Docs → doc}/html/struct_u_n_i_t_y___s_t_o_r_a_g_e___t.html
  181. BIN {Docs → doc}/html/sync_off.png
  182. BIN {Docs → doc}/html/sync_on.png
  183. BIN {Docs → doc}/html/tab_a.png
  184. BIN {Docs → doc}/html/tab_b.png
  185. BIN {Docs → doc}/html/tab_h.png
  186. BIN {Docs → doc}/html/tab_s.png
  187. +1 −0 doc/html/tabs.css
  188. 0 {Docs → doc}/html/unity_8h_source.html
  189. 0 {Docs → doc}/html/unity__internals_8h_source.html
  190. 0 {Docs → doc}/html/viz_8h.html
  191. 0 {Docs → doc}/html/viz_8h_source.html
  192. 0 {Docs → doc}/latex/Makefile
  193. 0 {Docs → doc}/latex/analyze_8h.tex
  194. +5 −0 doc/latex/annotated.tex
  195. 0 {Docs → doc}/latex/doxygen.sty
  196. +13 −0 doc/latex/files.tex
  197. 0 {Docs → doc}/latex/filter_8h.tex
  198. 0 {Docs → doc}/latex/gexf_8h.tex
  199. +115 −0 doc/latex/graphpass_8c.tex
  200. 0 {Docs → doc}/latex/graphpass_8h.tex
  201. 0 {Docs → doc}/latex/io_8h.tex
  202. 0 {Docs → doc}/latex/md__c_o_d_e__o_f__c_o_n_d_u_c_t.tex
  203. 0 {Docs → doc}/latex/md__r_e_a_d_m_e.tex
  204. 0 {Docs → doc}/latex/quickrun_8h.tex
  205. +2 −11 {Docs → doc}/latex/refman.tex
  206. 0 {Docs → doc}/latex/reports_8h.tex
  207. 0 {Docs → doc}/latex/rnd_8h.tex
  208. +2 −2 {Docs → doc}/latex/struct_node.tex
  209. +2 −2 {Docs → doc}/latex/struct_rank_node.tex
  210. 0 {Docs → doc}/latex/struct_u_n_i_t_y___s_t_o_r_a_g_e___t.tex
  211. 0 {Docs → doc}/latex/viz_8h.tex
  212. +2 −2 {Docs → doc}/man/man3/Node.3
  213. +2 −2 {Docs → doc}/man/man3/RankNode.3
  214. 0 {Docs → doc}/man/man3/UNITY_STORAGE_T.3
  215. 0 {Docs → doc}/man/man3/analyze.h.3
  216. 0 {Docs → doc}/man/man3/filter.h.3
  217. 0 {Docs → doc}/man/man3/gexf.h.3
  218. +42 −9 {Docs → doc}/man/man3/graphpass.c.3
  219. 0 {Docs → doc}/man/man3/graphpass.h.3
  220. 0 {Docs → doc}/man/man3/io.h.3
  221. 0 {Docs → doc}/man/man3/md__c_o_d_e__o_f__c_o_n_d_u_c_t.3
  222. 0 {Docs → doc}/man/man3/md__r_e_a_d_m_e.3
  223. 0 {Docs → doc}/man/man3/quickrun.h.3
  224. 0 {Docs → doc}/man/man3/reports.h.3
  225. 0 {Docs → doc}/man/man3/rnd.h.3
  226. 0 {Docs → doc}/man/man3/viz.h.3
  227. +5 −5 { → src}/headers/graphpass.h
  228. +53 −53 src/{ → main}/analyze.c
  229. +14 −14 src/{ → main}/filter.c
  230. 0 src/{ → main}/gexf.c
  231. +17 −17 src/{ → main}/graphpass.c
  232. +6 −6 src/{ → main}/io.c
  233. +5 −5 src/{ → main}/quickrun.c
  234. +6 −6 src/{ → main}/reports.c
  235. +4 −4 src/{ → main}/rnd.c
  236. +11 −11 src/{ → main}/viz.c
  237. 0 {assets → src/resources}/albertahealth.graphml
  238. 0 {assets → src/resources}/anarchist.graphml
  239. 0 {assets → src/resources}/cpp2.graphml
  240. 0 {assets → src/resources}/idlenomore.graphml
  241. 0 {assets → src/resources}/miserables.graphml
  242. 0 {assets → src/resources}/panama.graphml
  243. 0 {assets → src/resources}/snowden.graphml
  244. 0 { → src}/tests/analyze_test.c
  245. 0 { → src}/tests/filter_test.c
  246. +1 −1 { → src}/tests/quickrun_test.c
  247. +3 −3 { → src}/tests/runner_test_ana.c
  248. +2 −2 { → src}/tests/runner_test_qp.c
  249. 0 { → src}/tests/sample_graphs_test.c
  250. 0 { → vendor}/unity/unity.c
  251. 0 { → vendor}/unity/unity.h
  252. 0 { → vendor}/unity/unity_internals.h
View
@@ -1,3 +1,5 @@
graphpass
OUT
/.bundle/
/.yardoc
/_yardoc/

This file was deleted.

Oops, something went wrong.
View

This file was deleted.

Oops, something went wrong.
View

This file was deleted.

Oops, something went wrong.
Oops, something went wrong.

0 comments on commit 3a99b92

Please sign in to comment.