Improve filtering for cells

openphacts · Aug 19, 2019 · ee43cf99564e590eb1db979c4ff4f6d7f1d7ed35 · ee43cf9
1 parent 694678e
commit ee43cf99564e590eb1db979c4ff4f6d7f1d7ed35
Unified Split

Showing with 8 additions and 5 deletions.

+6 −4 nextprot-highlyExpressed.rq

+2 −1 nextprot-proteinHighlyExpressedInCell.rq
diff --git a/nextprot-highlyExpressed.rq b/nextprot-highlyExpressed.rq
@@ -5,7 +5,7 @@
 #+ method: GET
 #+ pagination: 50
 #+ defaults:
-  
-#+   - entry: http://nextprot.org/rdf/entry/NX_Q9Y6A2
+  
+#+   - entry: http://nextprot.org/rdf/entry/NX_O96000
 PREFIX : <http://nextprot.org/rdf#>
 PREFIX owl: <http://www.w3.org/2002/07/owl#>
@@ -40,8 +40,10 @@ select distinct ?tisslab where {
  ?_entry_iri :isoform ?iso.
  # get all expression
  ?iso :expression ?e1.
-  
-  # highly expressed 
-  
-  ?e1 :evidence/:expressionLevel :High. 
-  
-  ?e1 :term ?tissue .	  
+  
+  # highly expressed
+  
+  ?e1 :evidence/:expressionLevel :High.
+  
+  ?e1 :term ?tissue .
  ?tissue rdfs:label ?tisslab .
+  
+  # Filter out cells
+  
+  filter not exists {?tissue :childOf cv:TS-2035}
 }
diff --git a/nextprot-proteinHighlyExpressedInCell.rq b/nextprot-proteinHighlyExpressedInCell.rq
@@ -45,5 +45,6 @@ select distinct ?tissue ?tisslab where {
  ?e1 :term ?tissue .
  ?tissue rdfs:label ?tisslab .
  ?tissue a :NextprotAnatomyCv  .
-  
-  filter not exists {?tiss2 a :NextprotAnatomyCv  . ?tiss2 :childOf ?tissue filter (?tiss2 != ?tissue )}
+  
+  #Return only cells
+  
+  ?tissue :childOf cv:TS-2035
 }