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Commits on Jun 29, 2020
  1. README updates for #71.

    ruebot committed Jun 29, 2020
  2. Add test for gexf.c (#67)

    greebie and ruebot committed Jun 29, 2020
    Co-authored-by: Nick Ruest <ruestn@gmail.com>
Commits on Feb 22, 2019
  1. Remove graph attributes from gexf output (not supported by networkx). (

    greebie authored and ruebot committed Feb 22, 2019
Commits on Oct 4, 2018
  1. Create coverage reports; resolve #58. (#65)

    ruebot authored and greebie committed Oct 4, 2018
  2. Use stdin, stdout, and stderr; resolves #47. (#63)

    greebie authored and ruebot committed Oct 4, 2018
    * Update README to reflect changes
    * Remove references to libgen in Makefile (no longer used for Mac or Linux).
    * Add test suite for input-output functions.
    * Remove debug flags from tests and have functions return (1) instead of exit(1).
    * Use #define instead of const for Ubuntu gcc.
    * Use stderr instead of stdout for error outputs.
Commits on Sep 10, 2018
  1. Quit graphpass on graph with > 500,000 edges in the graph; resolves #60

    greebie authored and ruebot committed Sep 10, 2018
    … (#61)
    
    * Add optional max-nodes and max-edges flags.
    * Some minor clean up of flags for alpha order.
Commits on Sep 5, 2018
  1. Normalize license headers; resolves #51. (#57)

    ruebot authored and greebie committed Sep 5, 2018
    - Update license header in all src files.
    - Update README
    - Rename LICENSE.txt to LICENSE
    - Make LICENSE consistent with other AU projects
  2. Setup TravisCI; resolves #30. (#56)

    ruebot authored and ianmilligan1 committed Sep 5, 2018
    - Update TravisCI
    - Setup CodeCov config
    - Update README
Commits on Sep 4, 2018
  1. Clean-up and organize project; resolves #40. (#50)

    ruebot authored and greebie committed Sep 4, 2018
    - Moves Docs -> doc
    - Moves tests -> src/tests
    - Moves headers -> src/headers
    - Moves src/*.c -> src/main
    - Moves unity -> vendor/unity
    - Updates Doxygen config
    - Update Doxygen generated docs
    - Update README
    - Update all src files that need to be updated to reflect re-org
    - Update Makefile so project builds
    - Clean-up whitespace in src files
    - Simplify Makefile
Commits on Sep 2, 2018
  1. Take a better approach to scaling using normalized (log(x)) formula. (#…

    greebie authored and ruebot committed Sep 2, 2018
    …46)
    
    * Resolves #45 
    * Resolves #25 
    * Add conditional on the case that max degree & min degree are equal.
    * Switch to regular degree instead of log when the maximum and minimum
    node sizes are equal (i.e. a complete graph).
    * Add one to degree for the case where all node degrees are equal to zero.
Commits on Aug 28, 2018
  1. Remove commented out code; resolves #28. (#44)

    ruebot authored and greebie committed Aug 28, 2018
  2. Add CONTRIBUTING.md; resolves #42. (#43)

    ruebot authored and greebie committed Aug 28, 2018
  3. Use XML 1.0; resolves #26. (#41)

    ruebot authored and greebie committed Aug 28, 2018
    - Roll back to XML 1.0 from 1.1 introduced in
    d17b57c
    - Roll back to Gexf 1.2 from 1.3 introduced in
    d17b57c
    - Switch line ending encoding from \n to \x0A
    - Clean up whitespace in file
  4. Add issue template; resolves #36. (#37)

    ruebot authored and greebie committed Aug 28, 2018
  5. Add Pull Request template; resolves #35. (#38)

    ruebot authored and greebie committed Aug 28, 2018
Commits on Aug 27, 2018
  1. Merge pull request #32 from ruebot/issue-29

    greebie committed Aug 27, 2018
    Remove SOMETHING.am; resolves #29.
  2. Merge pull request #33 from ruebot/issue-31

    greebie committed Aug 27, 2018
    Remove .atom-build.yml; resolves #31.
  3. Remove SOMETHING.am; resolves #29.

    ruebot committed Aug 27, 2018
Commits on Jun 12, 2018
  1. Kill Graphpass on graphs with greater than 40,000 nodes (Issue #22) (#23

    greebie authored and ianmilligan1 committed Jun 12, 2018
    )
    
    * Upgrade gexf output to 1.3.
    * Kill graphpass on nodes > MAX_NODES (currently set to 40,000).
    * Review request for using CONSTANT instead of "40k"
    * Create verbose mode (-v or --verbose).
    * Set MAX_NODES to 50000.
    * "Less" should be "Fewer" in error message.
Commits on Mar 29, 2018
  1. Add anarchist.graphml for testing large outputs with unescaped values. (

    greebie authored and ruebot committed Mar 29, 2018
    #16)
    
    Fix xml_escapes for labelling (issue #15)
    Give namespace for user generated variables and distinguish between constant and non-constant variables. (issue #13)
Commits on Mar 27, 2018
  1. Add Rank Order Testing in Graphpass (#14)

    greebie authored and ianmilligan1 committed Mar 27, 2018
    * More unit tests; remove graphpass_test.h which is no longer needed.
    
    * Add modularity test.
    
    * Include some basic statistical functions: mean, variance, std.
    Include unit tests.
    Add "idRef" to keep track of node ids from original graph to filtered graph.
    
    * Add p-value calculation (from gpl source, attributed).
    
    * Add method to calculate p-value from two rank-orders based on element.
    
    * More unit tests.  Include rank-order test output to pdv.
Commits on Mar 22, 2018
  1. Remove boilerplate for testing purposes.

    greebie committed Mar 22, 2018
    Take FILEPATH information out of the header (only need to ingest the graph).
Commits on Mar 21, 2018
  1. Add -lm?

    greebie committed Mar 21, 2018
  2. Remove -g for unit tests.

    greebie committed Mar 21, 2018
  3. Add igraph library calls to Makefile.

    greebie committed Mar 21, 2018
    Exit(-1) if graphpass cannot find file.
Commits on Mar 20, 2018
  1. Fix cleaning in Makefile.

    greebie committed Mar 20, 2018
  2. Fix clean in Makefile.

    greebie committed Mar 20, 2018
Commits on Mar 19, 2018
  1. Fix bug where extra ".graphml" appears.

    greebie committed Mar 19, 2018
    Build infrastructure for unit testing.
  2. Merge pull request #12 from archivesunleashed/readme

    greebie committed Mar 19, 2018
    Minor tweaks after working through install docs
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